Insertion junction: CLIP2.004916_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004916
Chromosome:chromosome 12
Location:653687
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g493300 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCACCTCCGGCCTGTACTTGTAGCTGATGATGGCGATGAGCAGGTTG
Internal bar code:ACTTGGGTTCAAGATCAGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:120
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGTACGGTCGCAGATGA
Suggested primer 2:AAACGAAACGAAAGCCTGCC