Insertion junction: CLIP2.004919_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004919
Chromosome:chromosome 1
Location:2606959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGAGGCGGAGGGTCAGCCCCGTCGATGGCCCTCGAGGCTGGTCAGCT
Internal bar code:ACATGTACTAATTCAGATAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:5066
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCACGCAAAACAAACC
Suggested primer 2:CGCTAAGGGCCCTAAACACA