Insertion junction: CLIP2.004924_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004924
Chromosome:chromosome 6
Location:6480004
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294000 CGL113 Dienelactone hydrolase family protein; (1 of 2) K01061 - carboxymethylenebutenolidase (E3.1.1.45) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTATCCCTGGATTCGGCGGGCGATGTCACGACCGGAATAGACTCAATA
Internal bar code:CTAAGCGTCGAAAGTAGAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:799
LEAP-Seq percent confirming:8.88889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:82
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACAAAAGGTGCGCAAGA
Suggested primer 2:CGACCCGGTGGAAGGTTAAA