Insertion junction: CLIP2.004929_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004929
Chromosome:chromosome 6
Location:1458869
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g260250 CEMA,CEM1,YCF10 putative proton extrusion protein cemA, chloroplastic; (1 of 1) PTHR33650:SF1 - CEMA-LIKE PROTON EXTRUSION PROTEIN-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCGCGCACCGCCCATGACGGAGCTGCAAATGTTTGAGCATCTCGCTG
Internal bar code:GACTTTTGATTGTTTTGCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGTGCTGTTGGGACACT
Suggested primer 2:TACTCCCCTAACCCCACTCG