Insertion junction: CLIP2.004934_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004934
Chromosome:chromosome 2
Location:3592576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099601 (1 of 4) PF01342 - SAND domain (SAND) CDS
Cre02.g800214 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGAGGGCACAGCGGCGGCTGGTGTGCCGTCGGCTGCGGCGGCGGCAG
Internal bar code:AATTACATCTGTATGTGCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:959
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTTCCTCCTCCTCCTCT
Suggested primer 2:TACAGAACACGCCGTACCAC