Insertion junction: CLIP2.004941_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004941
Chromosome:chromosome 6
Location:2656048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270400 GT90-6,GT90F6 GT90 family protein 6; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGACGAGCTGCGGGGGCTGAGAGCGACGTCCGCCCTCGGCCGGCCACG
Internal bar code:AGGTGATGGTAAGGCATGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1354
LEAP-Seq percent confirming:73.5849
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCACCGTTGTAGATGCT
Suggested primer 2:GCCGTTCCCTGACATTCTCA