Insertion junction: CLIP2.004942_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004942
Chromosome:chromosome 3
Location:1562663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152250 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGAAGTTGACTGCGCCCACCTGCGCCATGGAGGGGATGACGTGGCC
Internal bar code:GACGAATTTGTAGCGAAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1610
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTACGTACATCGGAGGC
Suggested primer 2:AGTGTGTTGGTGAGGTTGCA