Insertion junction: CLIP2.004946_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004946
Chromosome:chromosome 12
Location:7740382
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554600 CGL146 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCATCTGAGGCAACGTAGGTGTATGACTGCCCCGCATCCGCCTGCCA
Internal bar code:GTTGAATTTCGAAGTTCTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2486
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCGTCCAGCTCGTGTCTT
Suggested primer 2:CATCCAGACTCGCGAGTACC