Insertion junction: CLIP2.004952_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004952
Chromosome:chromosome 1
Location:5431886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038350 (1 of 39) IPR009003 - Peptidase S1, PA clan intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGAACAAAAGTAGCCGTGCCCTGCTTCCGCGAGGTGCCACAGCGTG
Internal bar code:TTATGGGAATGAAGCTGGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGGCGGGAATAATCATA
Suggested primer 2:GATCCATTGCTAGCGGACGA