Insertion junction: CLIP2.004958_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004958
Chromosome:chromosome 10
Location:3251344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442650 (1 of 1) PTHR10887:SF366 - DNA-BINDING PROTEIN-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCGAATGGGGCGACATGTGCTGGACTTCATTGGAGTGCAGGCCCCT
Internal bar code:GTCTCTGATAAAATCGTTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1818
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCCCAACGACAATTTG
Suggested primer 2:GATAATCAAGGCTCCCGGCA