Insertion junction: CLIP2.004958_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004958
Chromosome:chromosome 10
Location:3251346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442650 (1 of 1) PTHR10887:SF366 - DNA-BINDING PROTEIN-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCAGGCAGGAGTGCATGGAGGCACATGCGCCCCGCAGCCTCCCTGC
Internal bar code:GTCTCTGATAAAATCGTTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2300
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GATAATCAAGGCTCCCGGCA
Suggested primer 2:TGCAGCCCAACGACAATTTG