Insertion junction: CLIP2.004961_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004961
Chromosome:chromosome 12
Location:9428079
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541200 (1 of 7) PTHR30520 - FORMATE TRANSPORTER-RELATED intron
Cre12.g541211 putative protein kinase; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGAATGTAGGTGTGTGTGTGTGTGTGTGTGCGAGTGTGTATACGTGT
Internal bar code:GTTAAATGTAGCATACGTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5310
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCGTGAACATTGTGCAA
Suggested primer 2:GCGGAATGGAGTATGCGGTA