Insertion junction: CLIP2.004965_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004965
Chromosome:chromosome 17
Location:3046320
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g720050 FTSH2,FHL2 (1 of 1) PTHR23076:SF72 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 2, CHLOROPLASTIC-RELATED; membrane AAA-metalloprotease, chloroplast 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATCGGGCAGCGTGCCGATGTTCCGCGTTGTAGGAGAATAAATTTTG
Internal bar code:CGATAAGCATTCTCCACACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:566
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGATGGAGAAGGAGACC
Suggested primer 2:ATGGTTATTGGGGGCTTGGG