Insertion junction: CLIP2.004979_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004979
Chromosome:chromosome 3
Location:5850141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188250 AGP4,STA6 ADP-glucose pyrophosphorylase small subunit; (1 of 1) PTHR22572//PTHR22572:SF79 - SUGAR-1-PHOSPHATE GUANYL TRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGCTGTGCTCCATGGATGCACGGTGCAGTCGTGCCCAAAAGTCTTC
Internal bar code:TACCACCACGGGTAAGGTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2540
LEAP-Seq percent confirming:61.7886
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGATTGAGTGTCCTTGG
Suggested primer 2:TGAGTAAAGTCACGCACGCT