Insertion junction: CLIP2.004982_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004982
Chromosome:chromosome 11
Location:3756577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479200 (1 of 5) PF00995 - Sec1 family (Sec1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGGTGCATCCCACCGTCACGTCCGTGGTCGTTTACTGCTCGGTGTCG
Internal bar code:GTCAACTTAACAGAGACTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1779
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CACAACACCCCCATTTGCTG
Suggested primer 2:AGCGGCATTCTGAACTGACA