Insertion junction: CLIP2.004990_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004990
Chromosome:chromosome 3
Location:9061516
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g202113 (1 of 1) 6.3.2.6 - Phosphoribosylaminoimidazolesuccinocarboxamide synthase / SAICARs intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACGCCAGGACGCCAACGGTGTGATTCACATCATTGACGAGGTGCACA
Internal bar code:GTATCCACTCGGGGCTATGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:340
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTGTAGGTTGGCCAGG
Suggested primer 2:CGGGTCTCCATTGGTTTCCA