Insertion junction: CLIP2.004992_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004992
Chromosome:chromosome 3
Location:4569837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176350 PLAP5,PLP5 (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin); Plastid lipid associated protein 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTAAAAGCTGCTCCCTCGGTCCCTCACTGCCTCCCTACAGCCC
Internal bar code:TACAGTGTTCGTAGCTGAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:210
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TAACTGACGTGTGGGTCTGC
Suggested primer 2:CGAACAGTGTGCCCTTGTTG