Insertion junction: CLIP2.004993_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004993
Chromosome:chromosome 7
Location:3730971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338000 MCM2 (1 of 1) K02540 - DNA replication licensing factor MCM2 (MCM2); Minichromosome maintenance protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGCCCGGCCCACTCTCAAATTCGCAGTCCTTCAGCCCAAAGGCTCG
Internal bar code:ACTGGCTCTGCCTTTTCCTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1428
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCAGCAGCGATTTAATG
Suggested primer 2:AAGGTCAGGAACGATGCAGG