Insertion junction: CLIP2.004998_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004998
Chromosome:chromosome 2
Location:1725838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086100 CGL40 Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGAAGGTGCCAGGCAGCGTAGCTGCACCGTGTGTAACGCACCCGCTT
Internal bar code:TTGATTAGTCGGCCAAGACCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2654
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCTCCATCTCCACTGG
Suggested primer 2:GCGTCCGAATGAATGTCAGC