Insertion junction: CLIP2.005001_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005001
Chromosome:chromosome 8
Location:2246813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370550 (1 of 1) 1.1.99.39 - D-2-hydroxyglutarate dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGCACCCCTCACCTGCACGGCTGCACGCGTCCCGCCCAACCTCCCCA
Internal bar code:CAACTACCGGGGTTTAGTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2206
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACTCCTCATAGCCACCT
Suggested primer 2:GCGCTGACGATCCAACAATC