Insertion junction: CLIP2.005005_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005005
Chromosome:chromosome 7
Location:337469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314450 SMM22,CGL33B (1 of 1) PTHR12176:SF19 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN; conserved methyltransferase of unknown function 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTGGCCAGATAGTAGCCAGATCCGCTTAAAACTCCATTGTGTTCTTG
Internal bar code:CTCGCTGGTTTAGATAATTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2844
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGAGTGTGCTGTGCTGG
Suggested primer 2:CTGTGGCCCTCATTTGTTGC