Insertion junction: CLIP2.005006_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005006
Chromosome:chromosome 11
Location:1236859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467692 (1 of 5) PF07466 - Protein of unknown function (DUF1517) (DUF1517) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCTGAATTGATGCGGCTCGGCATGCGATCCCAGTTGCGGATTCCGC
Internal bar code:AATATGTGGTCAGGTACATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2311
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGAGCTACGGTCGTCAC
Suggested primer 2:GCGGGTGCTTGCTTGTAAAA