Insertion junction: CLIP2.005008_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005008
Chromosome:chromosome 3
Location:1944714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155250 (1 of 1) IPR002202//IPR029058 - Hydroxymethylglutaryl-CoA reductase, class I/II // Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCTCGCCCGCGCCGTCATCTGCGTCGGTTGTGTTGCCGCCGGGCCGC
Internal bar code:TATCCACCTAAAGGTCGGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1344
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCGTATGTCCCAGGAGG
Suggested primer 2:GATACCATCCCTTCGGCCAG