Insertion junction: CLIP2.005008_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005008
Chromosome:chromosome 3
Location:1944753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155250 (1 of 1) IPR002202//IPR029058 - Hydroxymethylglutaryl-CoA reductase, class I/II // Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAAGAAGCTGGACGCGGCGACGGTGGGAAGCATTGCCTCGGCTGCCGCT
Internal bar code:TATCCACCTAAAGGTCGGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GATACCATCCCTTCGGCCAG
Suggested primer 2:GCTTCGTATGTCCCAGGAGG