Insertion junction: CLIP2.005009_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005009
Chromosome:chromosome 3
Location:741818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145987 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCTCTAAAGGTTGTTGTGGCGGCGGCGGCGGCGGCGGCTGTGACAGC
Internal bar code:GTACTAGGTGACAAGCTAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:189
LEAP-Seq percent confirming:4.34783
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAATGTGCTACAGCCAGG
Suggested primer 2:TAGGGTTGTCAGTTCGGCAC