Insertion junction: CLIP2.005014_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005014
Chromosome:chromosome 16
Location:4371985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668650 (1 of 1) PTHR34204//PTHR34204:SF2 - FAMILY NOT NAMED // RNA-BINDING ASCH DOMAIN PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGTCGGGTCATTTGTTGATTTGTCGAGCCGACCGCCCGGCCAAAAGC
Internal bar code:AGTACCTGGCTCCAGAGCCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1239
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGAGTGGATTAAACAGCG
Suggested primer 2:ATGTGCATTACCACTGCCGA