Insertion junction: CLIP2.005020_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005020
Chromosome:chromosome 4
Location:645345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217946 (1 of 1) PTHR22769:SF35 - NUDIX HYDROLASE FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTACGCTGGGTTTATGTAGTCGCTCGAGGATGGCGACGGGCCGGGCG
Internal bar code:TGTAAAAGGACCCGGGGGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1581
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCATTATCCCTTGCTTG
Suggested primer 2:AACAGAGCGAGGTTAGCACC