Insertion junction: CLIP2.005020_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005020
Chromosome:chromosome 4
Location:645345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217946 (1 of 1) PTHR22769:SF35 - NUDIX HYDROLASE FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGCCAACCCCTTCGCGCCAGCTCAGGGCGCAACTTCCTCCAGCTCATC
Internal bar code:TGTAAAAGGACCCGGGGGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGAGCGAGGTTAGCACC
Suggested primer 2:GGCGCATTATCCCTTGCTTG