Insertion junction: CLIP2.005025_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005025
Chromosome:chromosome 12
Location:2354680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507950 CGL98 possible permease; (1 of 1) PTHR22911//PTHR22911:SF60 - ACYL-MALONYL CONDENSING ENZYME-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCACAGTGAGTAGATGCAGCTGACCTGAGCTTGAGGGGGAAAATGCAC
Internal bar code:TTGTAGCGTGTTCTCCTTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:974
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGTCAACGCCTAGACGG
Suggested primer 2:GTGGCCGGTGATATACAGGG