Insertion junction: CLIP2.005025_5

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005025
Chromosome:chromosome 13
Location:2911259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583450 EZY17 Early zygote expressed protein; (1 of 6) PTHR15907:SF21 - DUF614 FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGTGCATGAACGAGAACTGGCGGAATGTGCTGCCATTGAATCCCTGC
Internal bar code:TTAGACGCGAGAATTGGTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2590
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTTGTCCCTCAGGTGGC
Suggested primer 2:CAGAACGCCTATCCATCCCC