Insertion junction: CLIP2.005027_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005027
Chromosome:chromosome 7
Location:3663697
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g337516 CGL75,SMM27 (1 of 1) PTHR18895//PTHR18895:SF74 - METHYLTRANSFERASE // HEMK METHYLTRANSFERASE FAMILY MEMBER 1; Conserved in the green lineage 75 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTACACCCTACCCCAACCCTCCGCTCCCTCCATCCCCGCCCGCGCACG
Internal bar code:CGTGTGAGGGATAAAGTTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGGGGTATGGTACTGTG
Suggested primer 2:GCTGCTGTTGGTAGTTGTGC