Insertion junction: CLIP2.005027_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005027
Chromosome:chromosome 11
Location:544062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467601 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGGGCGTCCCGGCTCAGAGCACATGAGACATTAGAGTCAACGCTTCCA
Internal bar code:GAAAGTTCTCATTGTGCTCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1676
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATGTACGCGGCTTTTG
Suggested primer 2:GCGTGGGGCATGTAGTGATA