Insertion junction: CLIP2.005033_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005033
Chromosome:chromosome 5
Location:2346252
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g238322 TSW2 (1 of 2) 6.1.1.2 - Tryptophan--tRNA ligase / Tryptophanyl-tRNA synthetase; Putative tryptophanyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCAAAGGTAGGGGAGTGAGTGGGTAGTGGGGGCGTGGGCGCGTGTAA
Internal bar code:TGGGAAAGTTAAGATTAAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:19.7917
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATTCCTGCCCGTTTCCC
Suggested primer 2:TAGGTCGAGGGGGAAAGAGG