Insertion junction: CLIP2.005034_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005034
Chromosome:chromosome 3
Location:1958142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGTGAAGTAGTGGGACGGGGTCGTGGCTTGCCGCCGGTAGCGGTGCA
Internal bar code:AAGATGGGGGTGATGGTCACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:148
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCGACGCTCTCAATACC
Suggested primer 2:AGAGCGGATACTGGGTGACT