Insertion junction: CLIP2.005042_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005042
Chromosome:chromosome 1
Location:4886228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034050 (1 of 1) PTHR11751:SF428 - PROTEIN NKAT-1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAACTGCTCAGCGCCTCGACGGCCTACCACACTACCACACACTGCTTT
Internal bar code:TGGGACCCGTATCACGGGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:526
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAAGGAGATACGCAGGT
Suggested primer 2:TGAAAGCTTCGCCTGTTTGC