Insertion junction: CLIP2.005045_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005045
Chromosome:chromosome 12
Location:3139138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500650 RNB2 (1 of 1) PTHR23355//PTHR23355:SF39 - RIBONUCLEASE // SUBFAMILY NOT NAMED; chloroplast RNase II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGACTGTGCTGATTGCCGTACTGGTGGGTGCCGTAGCTGCTGCCGTA
Internal bar code:CGGAATGACTCTATCTATGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2410
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAAACTGCAAACTCGTGA
Suggested primer 2:ATAGGCGTGTGCATGTGTGA