Insertion junction: CLIP2.005045_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005045
Chromosome:chromosome 12
Location:3139144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500650 RNB2 (1 of 1) PTHR23355//PTHR23355:SF39 - RIBONUCLEASE // SUBFAMILY NOT NAMED; chloroplast RNase II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGCGTACACGCTGGTGGGCTCTCCGGGCGCGACGGCGGCGGCGTCGG
Internal bar code:CGGAATGACTCTATCTATGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1010
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGCGTGTGCATGTGTGA
Suggested primer 2:CGCAAACTGCAAACTCGTGA