Insertion junction: CLIP2.005047_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005047
Chromosome:chromosome 2
Location:6319425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387550 CGL142 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAGGGCACGGACGGTACGCTGGAAGAAGGTGTCTCATCCGTCGTGCT
Internal bar code:CCGGCTCATCTAGCAACGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1441
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTTGGCATGCTCTGTA
Suggested primer 2:GTACGGTCGGGCGCTTAATA