| Insertion cassette: | CIB2 |
| Side of cassette: | 5' |
| Strand: | - |
| Strain: | CLIP2.005048 |
| Chromosome: | chromosome 9 |
| Location: | 6495088 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre09.g415500 | TCA1 | Translation factor for chloroplast petA RNA | 3'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | GTTCGGCTGCTATCAGACGCGTGTTCACGCATTTGTGTTTCAAGGACGAA |
| Internal bar code: | TGGGAGTCGAGCGTCAGGTGGC |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 3405 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 65 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 65 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | CACCGTTTGCGTCCACATTT |
| Suggested primer 2: | CCTTTTGGGTGCGCTTTGTT |