Insertion junction: CLIP2.005053_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005053
Chromosome:chromosome 3
Location:5244650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182150 TEF8 (1 of 1) PTHR30373:SF2 - UPF0603 PROTEIN YGCG; Thylakoid Lumen Protein 18.3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGTCTTTCCAGGGGTGCTGATGCTATTGCTGCCATGATTTTTGCAGTC
Internal bar code:AAAGTCAGTTCTGACGTTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5129
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTAGCCAGTCTGGATCT
Suggested primer 2:GAAGGTTGGGGTCCGAATGT