Insertion junction: CLIP2.005055_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005055
Chromosome:chromosome 11
Location:2487330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095111 VSR1 Vacuolar Sorting Receptor; (1 of 1) PTHR22765//PTHR22765:SF56 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // VACUOLAR-SORTING RECEPTOR 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCGAGGAGGAGGAGGGAGGGAGGGGGGCATAATTGCGCTACGTCTGG
Internal bar code:ATACCGTTCTACACGTTTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCGTTTTCGTTGGGTTT
Suggested primer 2:TACCTGCCCACCTACCTACC