Insertion junction: CLIP2.005057_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005057
Chromosome:chromosome 7
Location:5406540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350500 TSV,TSV1 Valyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF76 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // ATP BINDING/VALINE-TRNA LIGASE/AMINOACYL-TRNA LIGASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAGCGTGTTCCAGATATGCGCGCCCACGATACACGCCCCACAACGTC
Internal bar code:AGCTTAGCTATTTAAGCAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4934
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCCATAAGCTCCCCTCC
Suggested primer 2:GCAAGTAGAATGGAAGCGCG