Insertion junction: CLIP2.005058_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005058
Chromosome:chromosome 14
Location:847121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613050 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACATGCAGAACGCTCGAGGGACCATGATAGGCCCGGGTAGTTCCTGG
Internal bar code:AAACATGGTATGGATCTCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3852
LEAP-Seq percent confirming:95.0617
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGGCAATCTGTCTGGGG
Suggested primer 2:CCCTCATCTGCCGTGATCTC