Insertion junction: CLIP2.005058_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005058
Chromosome:chromosome 14
Location:847123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613050 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCAACTACGGTACGTGTTCTGTCTCTTACTCGCAGAACAGGTGGTGC
Internal bar code:AAACATGGTATGGATCTCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:572
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCATCTGCCGTGATCTC
Suggested primer 2:ATGTGGCAATCTGTCTGGGG