Insertion junction: CLIP2.005063_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005063
Chromosome:chromosome 7
Location:4074723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340650 CGL149 Conserved in the Green Lineage; (1 of 1) PF09430 - Protein of unknown function (DUF2012) (DUF2012) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATGCCCCAGGGCGCCGTCCGCAGGGTTATATACTTGTGTGTCGTAGA
Internal bar code:GATTAGGGTGCTTTATGACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1441
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGGCTTTAGGCTGAGA
Suggested primer 2:GCGATGCCAGTGTATTGCTG