Insertion junction: CLIP2.005064_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005064
Chromosome:chromosome 15
Location:1633956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750597 CDPK2 Calcium/calmodulin-dependent protein kinase; (1 of 2) PF00069//PF13499 - Protein kinase domain (Pkinase) // EF-hand domain pair (EF-hand_7) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAAAGGTTGGCCGGTGCGAGGGCCCCGCTGGCGCCCATGCACCGCCG
Internal bar code:AAGCCTACGGGCTCACGTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1382
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTTGCATGCCCGTGACAC
Suggested primer 2:TAGCGCCTTATAACCTGCCG