Insertion junction: CLIP2.005073_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005073
Chromosome:chromosome 16
Location:111919
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695450 SPL11,UAF4 U2 snRNP auxiliary factor, large subunit; (1 of 1) PTHR23139:SF68 - ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGTCTGTGGTGGCTGCTGCACTGCACACTGTGCGTAGGAGTCATATG
Internal bar code:AGCATGTTTATTATATCGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2610
LEAP-Seq percent confirming:93.8775
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCGACAGTGAGTACCAC
Suggested primer 2:CTGGTGGAGGACGAGGAGTA