Insertion junction: CLIP2.005079_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005079
Chromosome:chromosome 13
Location:2278158
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578600 (1 of 1) PTHR35464//PTHR35464:SF1 - FAMILY NOT NAMED // F18O14.9 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTACAACATGTACCGGGAGTGCTAGGCAACTAGGACTAGGATAAGCA
Internal bar code:CCCTTAGGCGTCACATCTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3272
LEAP-Seq percent confirming:98.8372
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGTCCCACCATCATCAC
Suggested primer 2:GGTTCATTCGGGATGTGGGT