Insertion junction: CLIP2.005087_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005087
Chromosome:chromosome 2
Location:7183856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390578 TRP23,FAP11 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL; Flagellar Associated Protein 11 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCAACCCAGGTGCGTGCGGGAAGAAGGGCTTGTGTCCATCTTTGCCA
Internal bar code:GCAGCGTGTGTGTTTCACTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1368
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTCTCCTCGCTGTCCAC
Suggested primer 2:AGCCGTCAATGAGCACTTCA