Insertion junction: CLIP2.005089_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005089
Chromosome:chromosome 6
Location:1635499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261850 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCTGCTGCAGCTCCGCTCGCAGCCGCTCCGGCGGCAGTAGCAGCAG
Internal bar code:GGTAGCTATCATGGTTTCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2707
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCACACGCTTCTGTACTT
Suggested primer 2:GCGTAGGACAGTGTATGCGA